BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C01LP1|AL425653
(803 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1651 1589 0.0
>3x_Contig1651
Length = 13087
Score = 1589 bits (801), Expect = 0.0
Identities = 802/803 (99%)
Strand = Plus / Minus
Query: 1 tcgacacgtatcaatgagtgagtttaccaagacagatttcaacgctggagattattccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12473 tcgacacgtatcaatgagtgagtttaccaagacagatttcaacgctggagattattccaa 12414
Query: 61 ttttcggcctagttatcctccagaatggtatcgcaccctgaatgagttccataaaggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12413 ttttcggcctagttatcctccagaatggtatcgcaccctgaatgagttccataaaggaaa 12354
Query: 121 tcgaaaccttgttatcgatgtgggctgcggtccaggtactgccaccttcgacatcagtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12353 tcgaaaccttgttatcgatgtgggctgcggtccaggtactgccaccttcgacatcagtag 12294
Query: 181 gaatctctcattcaaaagggtcattggagcagacatttctgagccaatgattgawaaggc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 12293 gaatctctcattcaaaagggtcattggagcagacatttctgagccaatgattgaaaaggc 12234
Query: 241 taaagggcgtgccatcgaggtagataactcggttaaattcgttgtttacaatggggaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12233 taaagggcgtgccatcgaggtagataactcggttaaattcgttgtttacaatggggaatt 12174
Query: 301 ggatgacattatatcacgtgacccatttaatcctagttcaaagcaggtaccagacttgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12173 ggatgacattatatcacgtgacccatttaatcctagttcaaagcaggtaccagacttgat 12114
Query: 361 aacgatggccgaatgcgctcactggatggattgggatactattttgggacaagtagccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12113 aacgatggccgaatgcgctcactggatggattgggatactattttgggacaagtagccaa 12054
Query: 421 gatcttaccaagtcaaggaaccttagcggtttggggctacgtagatcccgcattcgtcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12053 gatcttaccaagtcaaggaaccttagcggtttggggctacgtagatcccgcattcgtcga 11994
Query: 481 ttttcctgaacttgacgatgagattgaaaagttacaatacggagatgctccgttcggttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11993 ttttcctgaacttgacgatgagattgaaaagttacaatacggagatgctccgttcggttt 11934
Query: 541 gggaccatactggcaacaacccggtagacaaagattaagggatctatatcctcaattgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11933 gggaccatactggcaacaacccggtagacaaagattaagggatctatatcctcaattgcc 11874
Query: 601 tccttctgagaaatggttcactgatatcaatctctggagacacgacattagatcccaaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11873 tccttctgagaaatggttcactgatatcaatctctggagacacgacattagatcccaaga 11814
Query: 661 taacaaaaacaccccattaattatggaaaagacaatgacgcttgaagcgttcgacaagta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11813 taacaaaaacaccccattaattatggaaaagacaatgacgcttgaagcgttcgacaagta 11754
Query: 721 tacaacgacatggagtagctaccacaagtggcaacaactgcaccagaaacaaaacgatgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11753 tacaacgacatggagtagctaccacaagtggcaacaactgcaccagaaacaaaacgatgg 11694
Query: 781 atccatcaacgcaataaacccaa 803
|||||||||||||||||||||||
Sbjct: 11693 atccatcaacgcaataaacccaa 11671
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5011
Number of Sequences: 1807
Number of extensions: 5011
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 803
length of database: 10,358,551
effective HSP length: 16
effective length of query: 787
effective length of database: 10,329,639
effective search space: 8129425893
effective search space used: 8129425893
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)